This site lists all RN and Allied shipping lost on a day-by-day basis (including USN):

Mediterranean, RN, Fleet, Oran, Calabria, force, H, Q, Calabria, Battle, Cape, Spada, Taranto, Spartivento, Libya, Inshore, Squadron, Excess, Matapan, Sfax, Greece, Crete, 10th, Flotilla, Malta, Alexandria, Gibraltar

It covers Axis losses but I don't know how comprehensive that is.